Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSSDUP00000001966Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (287 aa)    
Predicted Functional Partners:
LOC111218078
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.493
ENSSDUP00000011183
Peptidase S1 domain-containing protein.
  
0.465
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.421
wdr90
WD repeat domain 90.
    
 0.419
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.418
LOC111225511
Zgc:112160; Belongs to the peptidase S1 family.
   
 0.411
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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