Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myo9bUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2010 aa)    
Predicted Functional Partners:
LOC111229493
Survival of motor neuron 1, telomeric.
      
 0.686
RHOB
Ras homolog family member B.
    
 0.662
LOC111233774
Uncharacterized protein.
    
 0.662
LOC111222939
Ras homolog gene family, member Ab.
    
 0.662
LOC111218955
Uncharacterized protein.
    
 0.662
LOC111218956
Uncharacterized protein.
    
 0.662
LOC111230710
Uncharacterized protein.
    
 0.662
LOC111219488
Ras homolog family member Ca.
    
 0.662
rhou
Uncharacterized protein.
    
 0.645
LOC111238886
Ras homolog family member Ub.
    
 0.645
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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