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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cunh6orf120Zgc:77929. (169 aa)    
Predicted Functional Partners:
tmub1
Transmembrane and ubiquitin-like domain containing 1.
      
 0.600
tmem259
Transmembrane protein 259.
      
 0.591
rnf170
Ring finger protein 170.
      
 0.590
tmub2
Transmembrane and ubiquitin-like domain containing 2.
      
 0.562
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
      
 0.556
tmbim6
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
      
 0.518
LOC111228583
ER lipid raft associated 2.
    
 
 0.447
LOC111235074
ER lipid raft associated 1.
    
 
 0.447
slc30a6
Solute carrier family 30 member 6.
   
    0.433
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.