Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rab11fip3RAB11 family interacting protein 3 (class II). (1087 aa)    
Predicted Functional Partners:
rab11fip4
RAB11 family interacting protein 4 (class II) b.
     
 
0.900
LOC111217810
RAB11 family interacting protein 4 (class II) a.
     
 
0.900
rab11a
RAB11a, member RAS oncogene family.
    
 0.760
LOC111231922
Uncharacterized protein.
    
 0.760
LOC111231923
RAB11B, member RAS oncogene family, a.
    
 0.760
LOC111222643
RAB11a, member RAS oncogene family, like.
    
 0.760
LOC111229181
Uncharacterized protein.
    
 0.760
gsc
Goosecoid.
    
   0.758
trappc6b
Trafficking protein particle complex 6b.
      
 0.747
HOOK3
Hook microtubule tethering protein 3.
      
 0.746
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.