close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc11Trafficking protein particle complex 11. (1124 aa)    
Predicted Functional Partners:
trappc8
Trafficking protein particle complex 8.
   
 0.997
trappc2
Trafficking protein particle complex 2.
    
 0.996
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.996
trappc2l
Trafficking protein particle complex 2-like.
    
 0.996
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.996
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.995
trappc12
Trafficking protein particle complex 12.
   
 0.995
trappc13
Trafficking protein particle complex 13.
   
 0.982
trappc9
Trafficking protein particle complex 9.
   
 
 0.976
trappc10
Trafficking protein particle complex 10.
     
 0.975
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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