Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
agaAspartylglucosaminidase. (342 aa)    
Predicted Functional Partners:
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
      
 0.623
LOC111240095
Radial spoke head component 4A.
      
 0.610
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
      
 0.598
dnai2
Dynein, axonemal, intermediate chain 2b.
      
 0.596
nsun5
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.593
neu4
Sialidase 4.
    
 
 0.592
galc
Galactosylceramidase b.
      
 0.590
lamp1
Lysosomal associated membrane protein 1a.
      
 0.564
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.548
PCDH20
Protocadherin 20.
      
 0.548
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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