Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC111223330Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E. (241 aa)    
Predicted Functional Partners:
LOC111238549
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.771
LOC111221159
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.771
LOC111234855
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.662
vps72
Vacuolar protein sorting 72 homolog a.
    
 
 0.654
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.625
LOC111239853
Prothymosin alpha b.
   
 
 0.609
ino80
INO80 complex ATPase subunit.
    
 
 0.551
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.549
LOC111227991
Histone H2A; Belongs to the histone H2A family.
   
 
 0.549
ENSSDUP00000027664
Histone_H2A_C domain-containing protein.
   
 
 0.549
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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