Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
UNC79Unc-79 homolog, NALCN channel complex subunit. (2411 aa)    
Predicted Functional Partners:
nalcn
Sodium leak channel, non-selective.
   
 0.996
ENSSDUP00000030705
UNC80 domain-containing protein.
   
 0.992
FAM155A
Family with sequence similarity 155 member A.
    
 
 0.953
LOC111222765
Family with sequence similarity 155 member A.
    
 
 0.953
psma8
Proteasome subunit alpha type.
    
   0.906
cacna1e
Calcium channel, voltage-dependent, R type, alpha 1E subunit a.
   
 0.880
LOC111227043
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a.
   
 0.880
zmynd10
Zinc finger, MYND-type containing 10.
   
 0.880
LOC111228889
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 0.880
LOC111221156
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
   
 0.880
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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