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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC79Unc-79 homolog, NALCN channel complex subunit. (2411 aa)    
Predicted Functional Partners:
FAM155A
Family with sequence similarity 155 member A.
    
 
 0.999
LOC111222765
Family with sequence similarity 155 member A.
    
 
 0.999
nalcn
Sodium leak channel, non-selective.
   
 0.997
ENSSDUP00000030705
UNC80 domain-containing protein.
   
 0.994
cacna1e
Calcium channel, voltage-dependent, R type, alpha 1E subunit a.
   
 0.990
LOC111227043
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a.
   
 0.990
zmynd10
Zinc finger, MYND-type containing 10.
   
 0.990
LOC111228889
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 0.990
LOC111221156
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
   
 0.990
ENSSDUP00000006230
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.990
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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