Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCCPDHSaccharopine dehydrogenase a, tandem duplicate 1. (427 aa)    
Predicted Functional Partners:
glrx
Glutaredoxin (thioltransferase).
    
   0.535
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
   
 
  0.470
LOC111232364
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
   
 
  0.470
LOC111229011
Alpha-2-HS-glycoprotein 2.
     
  0.461
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
     
  0.461
ENSSDUP00000009701
Thioredoxin domain-containing protein.
      
 0.459
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.459
stoml1
Stomatin (EPB72)-like 1.
   
  
 0.449
foxred1
FAD-dependent oxidoreductase domain containing 1.
      
 0.446
LOC111235299
Tr-type G domain-containing protein.
     
  0.442
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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