STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psip1PWWP domain-containing protein. (542 aa)    
Predicted Functional Partners:
men1
Multiple endocrine neoplasia I.
    
 
 0.942
ENSSDUP00000001752
Pogo transposable element derived with ZNF domain a.
    
 
 0.823
ENSSDUP00000020072
Pogo transposable element derived with ZNF domain b.
    
 
 0.823
kmt2b
Lysine (K)-specific methyltransferase 2Bb.
    
 
 0.772
LOC111223127
Lysine (K)-specific methyltransferase 2Ba.
    
 
 0.772
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 
 0.772
smc3
Structural maintenance of chromosomes protein.
   
 
 0.723
Rbbp8
SAE2 domain-containing protein.
    
 
 0.629
rbbp5
Retinoblastoma binding protein 5.
   
 
 0.625
dnajb4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.604
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.