STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt17Polypeptide N-acetylgalactosaminyltransferase. (599 aa)    
Predicted Functional Partners:
st6galnac1
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.909
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.690
LOC111221437
Uncharacterized protein.
     
 0.686
LOC111219067
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.686
LOC111230818
Uncharacterized protein.
     
 0.683
LOC111230816
Uncharacterized protein.
     
 0.683
ENSSDUP00000016437
Si:dkey-202e17.1.
   
 
 0.672
chpf2
Hexosyltransferase.
      
 0.451
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.447
LOC111227578
Hexosyltransferase.
      
 0.437
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.