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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (899 aa)    
Predicted Functional Partners:
ddx18
RNA helicase.
  
 
0.977
wdr74
WD repeat domain 74.
   
 
 0.974
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.967
ebna1bp2
EBNA1 binding protein 2.
   
 0.962
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.962
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
  
0.960
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.959
rbm28
RNA binding motif protein 28.
   
 0.955
ENSSDUP00000019600
RRM domain-containing protein.
   
 0.955
pum3
Pumilio RNA-binding family member 3.
   
 
 0.953
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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