STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (899 aa)    
Predicted Functional Partners:
wdr74
WD repeat domain 74.
   
 
 0.989
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.985
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.984
rbm34
RNA binding motif protein 34.
   
 0.984
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.982
ddx54
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
  
 
0.981
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.981
rsl1d1
Ribosomal L1 domain containing 1.
   
 
 0.980
ebna1bp2
EBNA1 binding protein 2.
   
 0.980
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.980
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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