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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nipa2NIPA magnesium transporter 2. (368 aa)    
Predicted Functional Partners:
tubgcp5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.754
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
  
 0.707
unc50
Unc-50 homolog (C. elegans).
 
    
 0.600
mmgt1
Membrane magnesium transporter 1.
      
 0.590
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
      
 0.568
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.435
spty2d1
SPT2 chromatin protein domain containing 1.
      
 0.433
ppm1g
Protein phosphatase, Mg2+/Mn2+ dependent, 1G.
      
 0.420
mrs2
Magnesium transporter.
      
 0.420
slc35b3
Solute carrier family 35 member B3.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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