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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Brcc3BRCA1/BRCA2-containing complex, subunit 3. (280 aa)    
Predicted Functional Partners:
babam1
BRISC and BRCA1 A complex member 1.
    
 0.999
babam2
BRISC and BRCA1 A complex member 2.
    
 0.999
abraxas2
Abraxas 2, BRISC complex subunit.
    
 0.995
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.978
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
  
 0.973
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
 0.969
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
 0.969
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.969
psma5
Proteasome subunit alpha type.
   
 0.968
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 0.968
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.