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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000002313PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (210 aa)    
Predicted Functional Partners:
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.882
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.773
ENSSDUP00000030733
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.756
ncs1
Neuronal calcium sensor 1a.
    
 
 0.751
rab11a
RAB11a, member RAS oncogene family.
    
 0.713
LOC111231922
Uncharacterized protein.
    
 0.713
LOC111231923
RAB11B, member RAS oncogene family, a.
    
 0.713
LOC111222643
RAB11a, member RAS oncogene family, like.
    
 0.713
LOC111229181
Uncharacterized protein.
    
 0.713
rab25
RAB25, member RAS oncogene family b.
    
 0.676
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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