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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb5Ankyrin repeat and SOCS box containing 5a. (332 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.747
LOC111217678
Elongin B.
    
 0.608
ELOB
Elongin B.
    
 0.608
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.606
asb7
Ankyrin repeat and SOCS box containing 7.
  
 
0.552
LOC111216894
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.547
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.547
ENSSDUP00000008226
Ankyrin repeat and SOCS box containing 4.
  
 
 0.535
ENSSDUP00000000982
Uncharacterized protein.
  
 
 0.525
cdkn2c
Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).
  
 
   0.504
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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