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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliiFLII actin remodeling protein. (1276 aa)    
Predicted Functional Partners:
LOC111235545
Uncharacterized protein.
    
 
 0.818
lrrfip2
Leucine rich repeat (in FLII) interacting protein 2.
    
 
 0.818
LOC111218764
Uncharacterized protein.
    
 
 0.818
fkrp
Fukutin related protein.
   
  0.736
ewsr1
EWS RNA-binding protein 1b.
     
 0.588
Cdc42se1
CDC42 small effector 1.
      
 0.566
ENSSDUP00000023642
MYD88 innate immune signal transduction adaptor.
    
 0.553
LOC111220968
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 0.553
ENSSDUP00000004861
Latrophilin domain-containing protein.
    
 
 0.547
LOC111231518
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.547
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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