Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kcnv2Potassium channel, subfamily V, member 2a; Belongs to the potassium channel family. (468 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.781
LOC111227192
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.725
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
  
 0.682
LOC111226791
Sushi domain containing 1.
    
 0.681
pum3
Pumilio RNA-binding family member 3.
    
 
 0.680
nipbl
Nipped-B protein.
      
 0.677
rchy1
Uncharacterized protein.
     
 0.666
s100z
Protein S100; Belongs to the S-100 family.
   
 0.641
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.623
LOC111238666
Si:dkeyp-86f7.4.
    
 
 0.617
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.