Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111224847 | fech | ENSSDUP00000002509 | ENSSDUP00000001558 | Si:ch211-244b2.4. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.434 |
LOC111224847 | rps27a | ENSSDUP00000002509 | ENSSDUP00000004225 | Si:ch211-244b2.4. | Ribosomal protein S27a. | 0.510 |
LOC111224847 | trip12 | ENSSDUP00000002509 | ENSSDUP00000028582 | Si:ch211-244b2.4. | Thyroid hormone receptor interactor 12. | 0.761 |
fech | LOC111224847 | ENSSDUP00000001558 | ENSSDUP00000002509 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Si:ch211-244b2.4. | 0.434 |
rps27a | LOC111224847 | ENSSDUP00000004225 | ENSSDUP00000002509 | Ribosomal protein S27a. | Si:ch211-244b2.4. | 0.510 |
rps27a | trip12 | ENSSDUP00000004225 | ENSSDUP00000028582 | Ribosomal protein S27a. | Thyroid hormone receptor interactor 12. | 0.890 |
trip12 | LOC111224847 | ENSSDUP00000028582 | ENSSDUP00000002509 | Thyroid hormone receptor interactor 12. | Si:ch211-244b2.4. | 0.761 |
trip12 | rps27a | ENSSDUP00000028582 | ENSSDUP00000004225 | Thyroid hormone receptor interactor 12. | Ribosomal protein S27a. | 0.890 |