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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237757MALT paracaspase 1. (830 aa)    
Predicted Functional Partners:
bcl10
BCL10 immune signaling adaptor.
   
 0.995
LOC111218362
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.961
casp8
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.961
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.948
LOC111234378
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.948
LOC111220255
Protein kinase domain-containing protein.
   
 0.944
LOC111236845
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.913
LOC111230214
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.913
LOC111226417
Mitogen-activated protein kinase.
   
  0.904
LOC111219534
Mitogen-activated protein kinase.
   
  0.904
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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