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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nenfNeudesin neurotrophic factor; Belongs to the cytochrome b5 family. (177 aa)    
Predicted Functional Partners:
pacc1
Proton activated chloride channel 1.
      
 0.591
foxred2
FAD-dependent oxidoreductase domain containing 2.
    
 
 0.580
fopnl
Fgfr1op N-terminal like.
   
    0.545
LOC111236599
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
  
 0.504
ENSSDUP00000022542
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  
 0.504
erp27
Uncharacterized protein.
    
 
 0.502
znhit2
Zinc finger, HIT-type containing 2.
      
 0.485
poglut1
Protein O-glucosyltransferase 1.
      
 0.468
SUMF2
Sulfatase modifying factor 2.
    
 0.456
LOC111229454
Cytochrome c oxidase subunit 6A, mitochondrial.
   
  
 0.442
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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