Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111235105 | asz1 | ENSSDUP00000002622 | ENSSDUP00000022604 | Zgc:56699. | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | 0.583 |
LOC111235105 | eri1 | ENSSDUP00000002622 | ENSSDUP00000022106 | Zgc:56699. | Exoribonuclease 1. | 0.660 |
LOC111235105 | eri2 | ENSSDUP00000002622 | ENSSDUP00000019938 | Zgc:56699. | ERI1 exoribonuclease family member 2. | 0.498 |
LOC111235105 | henmt1 | ENSSDUP00000002622 | ENSSDUP00000021861 | Zgc:56699. | HEN methyltransferase 1. | 0.607 |
LOC111235105 | nxf1 | ENSSDUP00000002622 | ENSSDUP00000023805 | Zgc:56699. | Zgc:153681. | 0.517 |
LOC111235105 | nxt2 | ENSSDUP00000002622 | ENSSDUP00000015168 | Zgc:56699. | Nuclear transport factor 2-like export factor 2. | 0.477 |
LOC111235105 | parn | ENSSDUP00000002622 | ENSSDUP00000019998 | Zgc:56699. | Poly(A)-specific ribonuclease (deadenylation nuclease). | 0.563 |
LOC111235105 | piwil1 | ENSSDUP00000002622 | ENSSDUP00000031495 | Zgc:56699. | Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family. | 0.546 |
LOC111235105 | piwil2 | ENSSDUP00000002622 | ENSSDUP00000002397 | Zgc:56699. | Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family. | 0.536 |
LOC111235105 | prmt5 | ENSSDUP00000002622 | ENSSDUP00000016133 | Zgc:56699. | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.538 |
asz1 | LOC111235105 | ENSSDUP00000022604 | ENSSDUP00000002622 | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | Zgc:56699. | 0.583 |
asz1 | henmt1 | ENSSDUP00000022604 | ENSSDUP00000021861 | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | HEN methyltransferase 1. | 0.628 |
asz1 | piwil1 | ENSSDUP00000022604 | ENSSDUP00000031495 | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family. | 0.626 |
asz1 | piwil2 | ENSSDUP00000022604 | ENSSDUP00000002397 | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family. | 0.772 |
eri1 | LOC111235105 | ENSSDUP00000022106 | ENSSDUP00000002622 | Exoribonuclease 1. | Zgc:56699. | 0.660 |
eri1 | eri2 | ENSSDUP00000022106 | ENSSDUP00000019938 | Exoribonuclease 1. | ERI1 exoribonuclease family member 2. | 0.556 |
eri2 | LOC111235105 | ENSSDUP00000019938 | ENSSDUP00000002622 | ERI1 exoribonuclease family member 2. | Zgc:56699. | 0.498 |
eri2 | eri1 | ENSSDUP00000019938 | ENSSDUP00000022106 | ERI1 exoribonuclease family member 2. | Exoribonuclease 1. | 0.556 |
henmt1 | LOC111235105 | ENSSDUP00000021861 | ENSSDUP00000002622 | HEN methyltransferase 1. | Zgc:56699. | 0.607 |
henmt1 | asz1 | ENSSDUP00000021861 | ENSSDUP00000022604 | HEN methyltransferase 1. | Ankyrin repeat, SAM and basic leucine zipper domain containing 1. | 0.628 |
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