close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam72aFamily with sequence similarity 72 member B. (149 aa)    
Predicted Functional Partners:
LOC111225976
Rho GTPase activating protein 11A.
   
  
 0.628
ENSSDUP00000008829
Rho-GAP domain-containing protein.
   
  
 0.628
ndc80
NDC80 kinetochore complex component.
   
    0.607
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
    0.603
ttk
Ttk protein kinase.
   
  
 0.602
LOC111230826
COBW domain containing.
      
 0.599
LOC111229339
General transcription factor IIH subunit.
      
 0.584
LOC111232815
Peptidase M60 domain-containing protein.
      
 0.538
pbk
PDZ binding kinase.
   
    0.524
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.495
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.