Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rhbdl1Rhomboid-related protein 1; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family. (382 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
      
 0.765
ARHGAP6-2
Rho GTPase activating protein 6.
      
 0.764
cog3
Component of oligomeric golgi complex 3.
      
 0.683
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
      
 0.647
wdr24
WD repeat domain 24.
      
 0.633
LOC111233477
Rho GTPase activating protein 36.
      
 0.618
rhot2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 
 0.611
LOC111218899
Protocadherin 8.
      
 0.544
ttll2
Tubulin tyrosine ligase-like family, member 2.
      
 0.531
ubac2
UBA domain containing 2.
   
  
 0.529
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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