Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ap5m1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (491 aa)    
Predicted Functional Partners:
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
    
 0.987
ENSSDUP00000000417
SPG11 vesicle trafficking associated, spatacsin.
    
 
 0.973
ap5z1
Adaptor related protein complex 5 subunit zeta 1.
    
 0.947
ap4b1
Adaptor related protein complex 4 subunit beta 1.
   
 0.834
gak
Cyclin G associated kinase.
   
 0.805
LOC111234269
AP complex subunit beta.
   
 0.784
ap1b1
AP complex subunit beta.
   
 0.784
ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
   
 0.781
ap1g1
AP-1 complex subunit gamma.
   
 0.762
LOC111218078
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.753
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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