close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCOCShort coiled-coil protein a. (128 aa)    
Predicted Functional Partners:
Arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.710
LOC111233713
Uncharacterized protein.
   
 
 0.677
fez2
Si:ch211-57i17.1.
   
 
 0.677
LOC111227764
Si:dkey-288i20.2.
   
 
 0.677
fez1
Fasciculation and elongation protein zeta 1 (zygin I).
   
 
 0.675
arfrp1
ADP-ribosylation factor related protein 1.
      
 0.475
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.431
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.428
LOC111227078
Uncharacterized protein.
      
 0.426
LOC111217160
Family with sequence similarity 89 member B.
      
 0.422
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.