Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pdpk13-phosphoinositide dependent protein kinase 1b. (565 aa)    
Predicted Functional Partners:
LOC111230498
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
0.990
sgk2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
0.990
SGK1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
0.989
LOC111238251
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.988
akt1
V-akt murine thymoma viral oncogene homolog 1.
   
0.988
LOC111233400
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.988
LOC111234315
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.988
LOC111235389
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.988
LOC111217916
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
0.985
LOC111239086
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
0.985
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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