Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KAZNKazrin, periplakin interacting protein a. (486 aa)    
Predicted Functional Partners:
ENSSDUP00000003148
Uncharacterized protein.
 
      0.812
ENSSDUP00000000294
PDZ domain-containing protein.
    
 0.763
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.763
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.743
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.743
ppl
Periplakin.
    
 0.639
LOC111238113
Envoplakin b.
    
 0.603
evpl
Envoplakin a.
    
 0.603
lrrc28
Leucine rich repeat containing 28.
      
 0.539
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
   0.484
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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