Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221222Ephrin-A5a; Belongs to the ephrin family. (229 aa)    
Predicted Functional Partners:
epha2
Eph receptor A2 b.
   
 0.964
LOC111222863
Eph receptor A2 a.
   
 0.964
epha8
Uncharacterized protein.
   
 0.933
LOC111226155
Fibroblast growth factor receptor.
     
 0.816
LOC111234275
Fibroblast growth factor receptor.
     
 0.776
fgfr3
Fibroblast growth factor receptor.
     
 0.776
fgfr2
Fibroblast growth factor receptor 2.
     
 0.776
egfr
Receptor protein-tyrosine kinase.
    
 0.766
LOC111217738
Tyrosine-protein kinase receptor.
    
 0.764
LOC111228731
Tyrosine-protein kinase receptor.
    
 0.764
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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