STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221222Ephrin-A5a; Belongs to the ephrin family. (229 aa)    
Predicted Functional Partners:
epha2
Eph receptor A2 b.
   
 0.938
LOC111222863
Eph receptor A2 a.
   
 0.938
epha8
Uncharacterized protein.
   
 0.759
ntrk1
Tyrosine-protein kinase receptor.
    
 0.752
LOC111231251
Tyrosine-protein kinase receptor.
    
 0.710
LOC111228731
Tyrosine-protein kinase receptor.
    
 0.710
LOC111226155
Fibroblast growth factor receptor.
     
 0.688
LOC111234275
Fibroblast growth factor receptor.
     
 0.672
fgfr3
Fibroblast growth factor receptor.
     
 0.672
LOC111224260
Fibroblast growth factor receptor.
     
 0.668
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.