close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh20orf194Si:ch211-194c3.5. (1095 aa)    
Predicted Functional Partners:
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.549
DYNLT3
Dynein, light chain, Tctex-type 3.
    
 
 0.548
LOC111234762
Uncharacterized protein.
    
 
 0.548
dynlrb2
Dynein light chain roadblock.
    
 
 0.501
Dynlrb1
Dynein light chain roadblock.
    
 
 0.501
dnal4
Dynein light chain.
    
 
 0.481
LOC111217746
Mitogen-activated protein kinase kinase kinase 14a.
      
 0.465
fam168a
Family with sequence similarity 168 member A.
   
  
 0.449
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.441
LOC111224946
Nuclear receptor interacting protein 2.
      
 0.422
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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