close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqca1Zgc:153738. (843 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
 0.955
chmp3
Charged multivesicular body protein 3.
   
 0.746
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.742
ist1
IST1 factor associated with ESCRT-III.
    
 0.729
ubxn1
UBX domain protein 1.
   
 0.689
faap100
Si:dkey-57h18.1.
   
 0.685
nploc4
NPL4 homolog, ubiquitin recognition factor.
   
 0.685
yod1
YOD1 deubiquitinase.
   
 0.682
LOC111226164
Ataxin 3.
   
 0.627
zfand4
Zinc finger, AN1-type domain 4.
    
 0.615
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.