STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235077Bridging integrator 2a. (475 aa)    
Predicted Functional Partners:
ENSSDUP00000003047
Rho guanine nucleotide exchange factor (GEF) 38.
    
 
 0.658
dnmbp
Dynamin binding protein.
    
 
 0.658
LOC111220443
Growth arrest specific 7.
   
 0.612
gas7
Growth arrest-specific 7a.
   
 0.612
LOC111225061
WASP like actin nucleation promoting factor b.
   
 
 0.608
LOC111235999
WASP like actin nucleation promoting factor a.
   
 
 0.608
was
WASP actin nucleation promoting factor a.
   
 
 0.608
LOC111222565
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.560
ENSSDUP00000007704
Uncharacterized protein.
    
 
 0.560
cltc
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.560
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.