STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (302 aa)    
Predicted Functional Partners:
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
 
  
 0.831
eaf1
ELL associated factor 1.
      
 0.599
rerg
RAS like estrogen regulated growth inhibitor.
      
 0.591
ell2
Elongation factor, RNA polymerase II, 2.
      
 0.586
rspry1
Ring finger and SPRY domain containing 1.
   
  
 0.585
LOC111239919
Zgc:110699.
      
 0.572
pdia5
Protein disulfide isomerase family A, member 5.
      
 0.560
efcab1
EF-hand calcium binding domain 1.
      
 0.538
nsun5
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.536
gpatch3
G patch domain containing 3.
      
 0.535
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.