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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngbNeuroglobin; Belongs to the globin family. (159 aa)    
Predicted Functional Partners:
mb
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.919
cygb
Cytoglobin 2; Belongs to the globin family.
      
 0.874
LOC111225863
Cytochrome b5 reductase 4.
   
 0.657
adgb
Androglobin; Belongs to the peptidase C2 family.
   
 
 0.656
LOC111226737
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.604
LOC111217636
KN motif and ankyrin repeat domains 2.
    
 
 0.595
edn1
Endothelin 1.
      
 0.594
nprl3
NPR3-like, GATOR1 complex subunit.
   
  
 0.594
LOC111220088
Rhomboid 5 homolog 1b (Drosophila).
   
  
 0.592
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
   
  
 0.591
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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