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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111230834Uncharacterized protein. (553 aa)    
Predicted Functional Partners:
cdc14a
Cell division cycle 14Ab.
  
  
 
0.907
LOC111227553
WD_REPEATS_REGION domain-containing protein.
   
 0.893
LOC111228884
Fizzy/cell division cycle 20 related 1b.
   
 0.893
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.893
cdc27
Cell division cycle 27.
   
 0.762
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
     
 0.755
ipo5
Karyopherin (importin) beta 3.
    
   0.751
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.746
anapc1
Anaphase promoting complex subunit 1.
    
 0.742
LOC111233796
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.732
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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