STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam161bFAM161 centrosomal protein B. (563 aa)    
Predicted Functional Partners:
cmtr2
Cap methyltransferase 2.
      
 0.573
cfap36
Cilia and flagella associated protein 36.
      
 0.570
lin52
Lin-52 DREAM MuvB core complex component.
      
 0.510
LOC111231286
Leucine zipper, putative tumor suppressor 1.
      
 0.434
lrrc74a
Leucine rich repeat containing 74A.
      
 0.433
ENSSDUP00000020994
EF-hand domain-containing protein.
      
 0.433
crppa
CDP-L-ribitol pyrophosphorylase A.
   
    0.431
cetn3
Centrin 3.
   
    0.431
Cetn3
HTH_Tnp_Tc3_2 domain-containing protein.
   
    0.431
LOC111226567
Centrin, EF-hand protein, 2.
   
    0.431
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.