STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smoxSpermine oxidase. (553 aa)    
Predicted Functional Partners:
sms
Spermine synthase.
     
 0.956
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.956
LOC111236285
Amine oxidase.
     
 0.917
LOC111226286
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.906
LOC111229303
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.904
LOC111217457
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.904
LOC111228945
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
    
 0.903
LOC111231960
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
    
 0.903
LOC111217232
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.902
LOC111226283
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.902
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.