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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gga3Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (709 aa)    
Predicted Functional Partners:
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.940
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.903
m6pr
Mannose-6-phosphate receptor (cation dependent).
    
 
 0.875
ENSSDUP00000002726
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.767
ENSSDUP00000012805
Uncharacterized protein.
    
 0.767
ARF6
ADP ribosylation factor 6.
    
 0.767
rps27a
Ribosomal protein S27a.
    
 
 0.752
ubb
Uncharacterized protein.
   
   0.741
ubc
Uncharacterized protein.
   
   0.741
mst1r
Macrophage stimulating 1 receptor b.
    
 0.607
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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