STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111230941cAMP responsive element binding protein 3-like 3 like. (499 aa)    
Predicted Functional Partners:
crebrf
Creb3 regulatory factor.
    
 0.935
LOC111233889
Uncharacterized protein.
    
0.934
LOC111219918
E1A binding protein p300 a.
    
 0.820
LOC111229253
CREB binding protein a.
    
 0.820
crebbp
CREB binding protein b.
    
 0.820
LOC111230324
E1A binding protein p300 b.
    
 0.820
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.806
mbtps2
Membrane-bound transcription factor peptidase, site 2.
     
 0.778
DCSTAMP
Dendrocyte expressed seven transmembrane protein.
    
 0.691
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.