Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231386MFS domain-containing protein. (544 aa)    
Predicted Functional Partners:
ints1
Integrator complex subunit 1.
    
 0.506
ints9
Integrator complex subunit 9.
    
 0.504
ints11
Integrator complex subunit 11.
    
 0.502
ints13
Integrator complex subunit 13.
    
 0.481
ints4
Integrator complex subunit 4.
    
 0.479
ints3
Integrator complex subunit 3.
    
 0.477
ints7
Integrator complex subunit 7.
    
 0.477
ints10
Integrator complex subunit 10.
    
 0.464
pros1
Protein S.
   
 0.441
LOC111229545
Synaptic vesicle glycoprotein 2.
  
     0.412
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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