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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc31a1Solute carrier family 31 member 1. (194 aa)    
Predicted Functional Partners:
atox1
Antioxidant 1 copper chaperone.
      
 0.603
LOC111218542
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.571
ccs
Copper chaperone for superoxide dismutase.
    
 
 0.565
mtf1
Metal-regulatory transcription factor 1.
    
 
 0.509
atp7a
ATPase copper transporting alpha.
    
 
 0.497
atp7b
ATPase copper transporting beta.
    
 
 0.497
ENSSDUP00000021024
Cytochrome c oxidase assembly homolog 11 (yeast).
      
 0.463
SLC39A11
Solute carrier family 39 member 11.
   
  
 0.444
LOC111225195
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
   
 
 0.438
lclat1
Lysocardiolipin acyltransferase 1.
      
 0.433
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.