STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111232433Slit homolog 3 (Drosophila). (1494 aa)    
Predicted Functional Partners:
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.796
ENSSDUP00000021057
Uncharacterized protein.
   
 0.796
robo2
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.759
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
   
 0.724
LOC111239343
Uncharacterized protein.
   
 0.723
robo3
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
   
 0.723
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.579
adgrl1
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.579
LOC111231056
Adhesion G protein-coupled receptor L2b, tandem duplicate 1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.579
LOC111231518
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.574
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.