gpatch11 protein (Seriola dumerili) - STRING interaction network

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[Homology]

Score

gpatch11

G patch domain containing 11. (264 aa)

Predicted Functional Partners:

rbm17

0.681

ccdc130

0.643

sf3b4

0.608

fau

0.600

NCBP1

0.580

ncbp2

0.579

zrsr2

0.548

sf3a2

0.545

mysm1

0.523

eif2s3

0.514

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCBP1	eif2s3	ENSSDUP00000009679	ENSSDUP00000005426	Nuclear cap binding protein subunit 1.	Eukaryotic translation initiation factor 2, subunit 3 gamma.	0.471
NCBP1	gpatch11	ENSSDUP00000009679	ENSSDUP00000003723	Nuclear cap binding protein subunit 1.	G patch domain containing 11.	0.580
NCBP1	ncbp2	ENSSDUP00000009679	ENSSDUP00000021219	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	rbm17	ENSSDUP00000009679	ENSSDUP00000020641	Nuclear cap binding protein subunit 1.	RNA binding motif protein 17.	0.415
NCBP1	sf3a2	ENSSDUP00000009679	ENSSDUP00000021737	Nuclear cap binding protein subunit 1.	Splicing factor 3a, subunit 2.	0.859
NCBP1	sf3b4	ENSSDUP00000009679	ENSSDUP00000016503	Nuclear cap binding protein subunit 1.	Splicing factor 3b, subunit 4.	0.673
NCBP1	zrsr2	ENSSDUP00000009679	ENSSDUP00000003674	Nuclear cap binding protein subunit 1.	Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.	0.593
ccdc130	gpatch11	ENSSDUP00000017954	ENSSDUP00000003723	Coiled-coil domain containing 130.	G patch domain containing 11.	0.643
eif2s3	NCBP1	ENSSDUP00000005426	ENSSDUP00000009679	Eukaryotic translation initiation factor 2, subunit 3 gamma.	Nuclear cap binding protein subunit 1.	0.471
eif2s3	fau	ENSSDUP00000005426	ENSSDUP00000013032	Eukaryotic translation initiation factor 2, subunit 3 gamma.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
eif2s3	gpatch11	ENSSDUP00000005426	ENSSDUP00000003723	Eukaryotic translation initiation factor 2, subunit 3 gamma.	G patch domain containing 11.	0.514
eif2s3	mysm1	ENSSDUP00000005426	ENSSDUP00000031108	Eukaryotic translation initiation factor 2, subunit 3 gamma.	Myb-like, SWIRM and MPN domains 1.	0.641
fau	eif2s3	ENSSDUP00000013032	ENSSDUP00000005426	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Eukaryotic translation initiation factor 2, subunit 3 gamma.	0.999
fau	gpatch11	ENSSDUP00000013032	ENSSDUP00000003723	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	G patch domain containing 11.	0.600
fau	mysm1	ENSSDUP00000013032	ENSSDUP00000031108	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Myb-like, SWIRM and MPN domains 1.	0.997
gpatch11	NCBP1	ENSSDUP00000003723	ENSSDUP00000009679	G patch domain containing 11.	Nuclear cap binding protein subunit 1.	0.580
gpatch11	ccdc130	ENSSDUP00000003723	ENSSDUP00000017954	G patch domain containing 11.	Coiled-coil domain containing 130.	0.643
gpatch11	eif2s3	ENSSDUP00000003723	ENSSDUP00000005426	G patch domain containing 11.	Eukaryotic translation initiation factor 2, subunit 3 gamma.	0.514
gpatch11	fau	ENSSDUP00000003723	ENSSDUP00000013032	G patch domain containing 11.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.600
gpatch11	mysm1	ENSSDUP00000003723	ENSSDUP00000031108	G patch domain containing 11.	Myb-like, SWIRM and MPN domains 1.	0.523