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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111233213Triosephosphate isomerase. (248 aa)    
Predicted Functional Partners:
LOC111233251
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.998
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.998
LOC111227910
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.998
pgk1
Phosphoglycerate kinase.
 
 0.997
tkfc
Triokinase/FMN cyclase.
  
 
 0.993
taldo1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.992
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 0.985
LOC111233742
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.977
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.977
LOC111226430
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
  
 0.970
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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