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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc30a5Solute carrier family 30 member 5. (784 aa)    
Predicted Functional Partners:
slc30a6
Solute carrier family 30 member 6.
  
 
0.860
LOC111233248
Solute carrier family 39 member 7.
  
 0.640
slc39a13
Solute carrier family 39 member 13.
   
 0.637
ttr
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.629
slc30a9
Solute carrier family 30 member 9.
  
 
 0.626
TMEM19
Transmembrane protein 19.
   
  
 0.589
slc39a9
Solute carrier family 39 member 9.
   
 
 0.567
LOC111225479
Solute carrier family 39 member 8.
  
 0.521
slc30a4
Solute carrier family 30 member 4.
  
 
 
0.508
SLC39A11
Solute carrier family 39 member 11.
   
 0.501
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.