Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc30a5Solute carrier family 30 member 5. (784 aa)    
Predicted Functional Partners:
slc30a6
Solute carrier family 30 member 6.
   
 
 0.976
slc30a9
Solute carrier family 30 member 9.
  
 
 0.790
slc39a13
Solute carrier family 39 member 13.
   
 0.789
LOC111233248
Solute carrier family 39 member 7.
  
 0.778
ttr
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.772
slc22a13
Solute carrier family 22 member 13b.
      
 0.732
slc33a1
Solute carrier family 33 member 1.
   
  
 0.721
ino80d
INO80 complex subunit Da.
      
 0.714
Scarf1
Scavenger receptor class F, member 1.
      
 0.714
TMEM19
Transmembrane protein 19.
      
 0.712
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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