close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111224485Calcium channel, voltage-dependent, alpha 2/delta subunit 1a. (1075 aa)    
Predicted Functional Partners:
cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
   
 0.740
cacnb2
Calcium channel, voltage-dependent, beta 2a.
   
 0.668
LOC111231115
Calcium channel, voltage-dependent, beta 2b.
   
 0.668
LOC111218998
Calcium channel, voltage-dependent, beta 3b.
   
 0.662
cacnb4
Calcium channel, voltage-dependent, beta 4a subunit.
   
 0.662
LOC111217370
Calcium channel, voltage-dependent, beta 3a.
   
 0.662
LOC111239914
Calcium channel, voltage-dependent, beta 4b subunit.
   
 0.662
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
  0.655
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
 
  0.655
LOC111227008
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
   
 
  0.655
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.