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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sarm1Sterile alpha and TIR motif containing 1. (712 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.742
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 
 0.654
ENSSDUP00000023642
MYD88 innate immune signal transduction adaptor.
    
 
 0.647
LOC111220968
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 
 0.647
Tirap
Toll-interleukin 1 receptor (TIR) domain containing adaptor protein.
    
 
 0.626
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
      
 0.590
traf4
TNF receptor-associated factor.
   
 0.574
LOC111218048
Transmembrane p24 trafficking protein 3.
    
 0.490
LOC111229163
Toll-like receptor adaptor molecule 1.
    
 0.490
LOC111230892
Transmembrane p24 trafficking protein 7.
    
 0.490
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.