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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222488Phospholipase A2, group XV. (417 aa)    
Predicted Functional Partners:
LOC111238928
Uncharacterized protein.
     
 0.926
pnpla6
Patatin-like phospholipase domain containing 6.
     
 0.921
lypla1
Lysophospholipase 1.
     
 0.917
ENSSDUP00000006068
Uncharacterized protein.
     
 0.907
LOC111222526
Lecithin-cholesterol acyltransferase.
  
  
 
0.902
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
  0.900
ENSSDUP00000025771
Phospholipase A(2).
     
 0.788
pla2g4a
Phospholipase A2.
   
 
 0.784
PLA2G12B
Phospholipase A2 group XIIB.
   
 
 0.773
LOC111235756
Uncharacterized protein.
   
 0.770
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.