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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000003898Uncharacterized protein. (697 aa)    
Predicted Functional Partners:
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.880
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.727
ifih1
Interferon induced with helicase C domain 1.
   
 0.721
ilf3
Interleukin enhancer binding factor 3b.
    
 
 0.676
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
 
 0.674
usp18
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 
 0.671
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
 
 0.669
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.658
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.658
MX1
MX dynamin like GTPase 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.640
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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