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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiad1UbiA prenyltransferase domain containing 1. (349 aa)    
Predicted Functional Partners:
acot13
Acyl-CoA thioesterase 13.
    
 0.951
coq2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.945
LOC111227716
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.916
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.901
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.901
coq5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
 0.895
idi1
Isopentenyl-diphosphate delta isomerase 1.
    
 0.874
hao2
Hydroxyacid oxidase 2 (long chain).
     
 0.864
hao1
Hydroxyacid oxidase (glycolate oxidase) 1.
     
 0.864
LOC111217813
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.850
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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